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Changelog

All notable changes to the Codex package are documented here.

Unreleased

[0.1.25] - 2026-08-14

What's Changed

  • Synced the vendored ARS suite to the v3.20.0 release at 3af9f03d5aadb0bca51af1440f20b5cbf97d6dba.
  • Added evidence-bound review and revision contracts, including durable evidence rows, author-confirmed review criteria, non-ranking revision roadmaps, author adjudication, and revision-evidence bundles.
  • Added the contained, consent-gated Codex citation transport for narrow citation-integrity checks, plus stronger human-subjects authority boundaries.
  • Vendored the optional sandboxed PDF content classifier as an advisory tool; it is not a required dependency and does not change structural PDF preflight.
  • Adapted the v3.20 indirect-injection no-call envelope to verify its upstream suite commit through the package source lock when the nested vendor tree has no .git directory.
  • Preserved the single-root Codex router, WORKFLOW.md entrypoint mapping, inactive Claude-only hooks, and separately vendored experiment-agent v1.1.0.

[0.1.24] - 2026-08-06

What's Changed

  • Updated the separately vendored experiment-agent tree from 9b063fa895eaf1f63ac99ac03f924f8d31aa8d26 (pre-v1.0.1) to e291e7dc7ca268b2de7e1a9cf23bc2eef5dc0651 (v1.1.0, upstream main head).
  • Added the v1.1.0 session-resume capability for study_manager_agent: the study-state protocol (references/study_state_protocol.md), the study_state.md template and worked example, the session-resume design spec and implementation plan under docs/, and the expanded study_manager_agent resume flow.
  • Preserved the experiment-agent WORKFLOW.md entrypoint rename with its Codex data_access_level/task_type frontmatter overlay; upstream .claude/ and .github/ dev files remain excluded. The ARS vendored tree is unchanged from 0.1.23 (still pinned at 5769d7b).

Notes

  • This closes the experiment-agent half of the 2026-08-06 alignment; both vendored source repositories now track their upstream main heads.

[0.1.23] - 2026-08-06

What's Changed

  • Updated the vendored ARS runtime from 828ef3b613b0e8b91830da3328a1e33d4eb5ab4c (v3.19.0) to 5769d7b51adfba45593ad95721436fd114aaa735 (post-v3.19.0 main, 2026-08-06). No worktree or branch content is included — the pin is the upstream main head.
  • Added the reviewer hardening track: the #574 role-scoped scoring contract with abstention and per-mode decision contracts, typed evidence anchors, coverage receipts and severity transport, the #576 three-gate Stage 3' re-review pre-commitment contract (schemas + synthesis checker + patch_digest), the #608 dispatch harness, the #609 empty-dissent rule, the #610 AR arithmetic-receipt grammar with the step-5 deterministic receipt calculator, and #611 protocol text-consistency locks.
  • Vendored the new held-out eval sets and adjudicated cohorts (seeded defects, persuasion-invariance paired controls, #610 baseline/post cohorts), medical venue disclosure policies with fail-closed rendering and the Frontiers submission-action fix, the Chinese-literature resolver client and API protocol, CARE / STARD 2015 / TRIPOD+AI condensed guidance with a study-design routing sequence, and bare /ars-* alias frontmatter names.
  • Vendored the community-maintained Pi wrapper (pi/ + root package.json) and .gitleaksignore for traceability; the Pi wrapper targets upstream SKILL.md paths and is not a Codex entrypoint.
  • Extended the WORKFLOW.md path adaptation to the new reviewer-contract lint family (decision contract, reviewer finding contract, reviewer role label, venue disclosure harness, and their tests); re-pinned the pipeline content locks after the overlay. Declared check_calibration_tiers.py inactive (it requires the non-vendored .claude/CLAUDE.md) and removed its entry from the vendored local pytest manifest.
  • Preserved the single-root-skill layout, WORKFLOW.md entrypoint mapping, Codex provider/content/consent boundaries, nested-distribution validator adaptations, macOS/Python compatibility patches, and materialized Desktop plugin bundle.

Notes

  • This sync pins upstream main at 5769d7b (44 commits past v3.19.0); the upstream suite version remains 3.19.0 until the next ARS release tag.

[0.1.22] - 2026-07-22

What's Changed

  • Updated the vendored ARS runtime from bbc0659272a511b422f6856cd6f44b6ccb2ac213 (v3.18.0) to 828ef3b613b0e8b91830da3328a1e33d4eb5ab4c (v3.19.0).
  • Added the local-PDF read-integrity preflight and sidecar contract, optional human-read read_scope attestations with partial-coverage handling, and revision-round claim-drift guards built from the claim-strength ladder and deterministic token-conservation checker.
  • Vendored the new human-read ledger schema, revision evidence and held-out measurement set, plus the PDF/read-scope design records and associated test coverage.
  • Preserved the single-root-skill layout, WORKFLOW.md entrypoint mapping, Codex provider/content/consent boundaries, nested-distribution validator adaptations, macOS/Python compatibility patches, and materialized Desktop plugin bundle. Re-pinned the pipeline content lock after the v3.19 overlay.

Notes

  • This sync pins the exact ARS release tag v3.19.0.

[0.1.21] - 2026-07-18

Changed

  • Renamed the Codex plugin identity, marketplace, and plugin directory to ars-codex so the Codex-native sibling is clearly distinguished from the upstream Claude Code ARS distribution.
  • Updated the plugin display name to ARS-Codex and added CLI-first marketplace installation instructions for external users.
  • Kept the bundled skill identifier $academic-research-suite stable to avoid breaking existing Codex workflow prompts and direct skill installations.

[0.1.20] - 2026-07-18

What's Changed

  • Updated the vendored ARS runtime from 039d94f670c47d996ca919d37b8753b0a8d4a140 (v3.17.0) to bbc0659272a511b422f6856cd6f44b6ccb2ac213 (v3.18.0).
  • Added the fixed-seat cross-model Reviewer 2 track, independent re-review judge pass and Judge Record, cache-age advisories with opt-in live re-validation, high-impact-first claim sampling, scope-conformance and search-bounded novelty advisories, and the held-out pipeline robustness set.
  • Preserved Codex provider/content/consent boundaries: external reviewer and judge tracks are never simulated, single-family or fallback execution is disclosed, and live cache re-validation stays tied to explicit verification work.
  • Vendored the upstream SessionStart update checker for traceability and tests without installing it as a Codex hook. Preserved the single-root-skill layout, WORKFLOW.md entrypoint mapping, nested-distribution validator patches, macOS/Python compatibility patches, and the materialized Desktop plugin bundle.

Notes

  • This sync pins the exact ARS release tag v3.18.0.

[0.1.19] - 2026-07-17

What's Changed

  • Updated the vendored ARS runtime from 73c898c842afae3f163ac571dfa098c72d7c82af (v3.16.0) to 039d94f670c47d996ca919d37b8753b0a8d4a140 (v3.17.0).
  • Added the canonical cross-model handoff envelope and dispatcher contract, least-privilege tools allowlists, executable panel-synthesis validation, pinned Stage 5/6 boundary semantics, the machine-readable degradation registry, and hermetic citation-gate transport fixtures.
  • Mapped dispatched cross-model transport to the Codex dispatching context, preserved explicit provider/content/consent gates, and exposed the new upstream validators in the optional full-runtime manifest.
  • Preserved the single-root-skill layout, WORKFLOW.md entrypoint renaming, nested-distribution validator patches, macOS/Python compatibility patches, and the materialized Codex Desktop plugin bundle. The pipeline-orchestrator content-lock hash changes only for the Codex WORKFLOW.md path overlay.

Notes

  • This sync pins the exact ARS release tag v3.17.0.

[0.1.18] - 2026-07-13

What's Changed

  • Updated the vendored ARS runtime from f86d68a80a6fd05bf51688ff39297ea603eda912 (v3.15.0) to 73c898c842afae3f163ac571dfa098c72d7c82af (v3.16.0).
  • Added upstream model tiering, risk-stratified cross-model verification and blind disagreement checkpoints, GPT-5.6 Sol provisional verifier support, API retrieval hardening, CARS introduction/title guidance, WP advisory evaluation updates, Korean routing triggers, and THIRD_PARTY.md.
  • Propagated Korean intent boundaries into the Codex router and planner, kept model tiering advisory unless per-dispatch Codex model selection exists, and retained explicit consent for all external cross-model uploads.
  • Preserved the single-root-skill layout, WORKFLOW.md entrypoint renaming, nested-distribution validator patches, macOS compatibility patches, and the materialized Codex Desktop plugin bundle.

Notes

  • This sync pins the exact ARS release tag v3.16.0.

[0.1.17] - 2026-07-04

What's Changed

  • Updated the vendored ARS runtime from 8157a15b3bfad94af5c3ac4d7a79d5a9362622f4 (v3.14.0) to f86d68a80a6fd05bf51688ff39297ea603eda912 (v3.15.0).
  • Added upstream ARS v3.15 release content, including release-gate hardening, command-invariants and changelog coverage checks, prompt-debt retirement round 2, defrift locks, SETUP cross-model parity checks, and the tools/release-discipline snapshot.
  • Preserved Codex packaging behavior: one root router skill, vendored workflow entry files named WORKFLOW.md, excluded Claude/plugin loader files, Codex-specific spec-consistency adaptations, Python 3.9 compatibility patches, and the materialized Codex Desktop plugin bundle.

Notes

  • This sync pins the exact ARS release tag v3.15.0.

[0.1.16] - 2026-07-02

What's Changed

  • Updated the vendored ARS runtime from 17c518b286e48bbcd19fa7d05ec4f7d2aeb01641 (v3.13.0-5-g17c518b, ARS main after the platform-port reminder update) to 8157a15b3bfad94af5c3ac4d7a79d5a9362622f4 (v3.14.0).
  • Added upstream ARS v3.14 release content, including eval-harness PR comment rendering, prompt-debt retirement updates, the July harness-retirement audit, release-aligned README/CITATION/MODE_REGISTRY surfaces, and refreshed setup and architecture docs.
  • Preserved Codex packaging behavior: one root router skill, vendored workflow entry files named WORKFLOW.md, excluded Claude/plugin loader files, Codex-specific spec-consistency adaptations, and the materialized Codex Desktop plugin bundle.

Notes

  • This sync pins the exact ARS release tag v3.14.0, not post-release ars/main.

[0.1.15] - 2026-06-29

What's Changed

  • Updated the vendored ARS runtime from c22c17eed8a5753aa60681be9734919f2e2f5b42 (v3.13.0-2-gc22c17e, ARS main after GitHub Copilot documentation updates) to 17c518b286e48bbcd19fa7d05ec4f7d2aeb01641 (v3.13.0-5-g17c518b, current ARS main).
  • Added the native-reviewed upstream Korean README and its spec-consistency lint coverage while preserving Codex-specific nested-distribution patches.
  • Added the upstream platform-port reminder workflow and pull request template reminder text in the vendored traceability copy.

Notes

  • This sync pins ARS main, not an exact upstream tag. The nearest upstream tag remains v3.13.0.

[0.1.14] - 2026-06-21

Fixed

  • Replaced the Codex Desktop plugin's skills symlink with a materialized bundled skills/academic-research-suite directory so Windows plugin caches register the bundled skill reliably.
  • Added a package quality gate that fails if the Desktop plugin bundle reverts to symlink-based skill packaging.

[0.1.13] - 2026-06-20

What's Changed

  • Updated the vendored ARS runtime from 529c6d25a3778843fb94edf9f03eda4cd7e0f416 (v3.12.0-19-g529c6d2, ARS main after the submission-package verifier slices) to c22c17eed8a5753aa60681be9734919f2e2f5b42 (v3.13.0-2-gc22c17e, ARS main after the GitHub Copilot documentation updates).
  • Added upstream ARS v3.12.1 and v3.13 mainline content, including reviewer-response triage modes, diff/patch revision mode adoption, format-profile support, provider-agnostic cross-model verification, Windows hook portability, Socratic adjacent-framing probe support, CITATION metadata, and repository instruction docs.
  • Added Codex alias coverage for ars-3w and ars-rebuttal-audit in both the root router and the optional full-runtime planner.
  • Preserved Codex packaging behavior: one root router skill, vendored workflow entry files named WORKFLOW.md, excluded Claude/plugin loader files, preserved nested upstream .github and root agents mirrors as inactive traceability/self-test fixtures, Codex setup/architecture overlays at the package root, nested-path lint adaptations, macOS Bash 3.2 audit wrapper compatibility, and explicit cross-model consent boundaries.

Notes

  • This sync pins ARS main, not an exact upstream tag. The nearest upstream tag is v3.13.0.

[0.1.12] - 2026-06-11

What's Changed

  • Updated the vendored ARS runtime from 2560a072386d4b1a035e5a40ed24ce1edbc0a356 (v3.11.1) to 529c6d25a3778843fb94edf9f03eda4cd7e0f416 (v3.12.0-19-g529c6d2, ARS main after the submission-package verifier slices).
  • Added upstream ARS v3.12 and post-tag mainline content, including sub-claim decomposition, cross-paper contradiction inventory, figure/table fidelity, experiment provenance intake, field-norm severity calibration, surface-form parity checks, repository hygiene config, and the submission package verifier.
  • Added Codex alias coverage for ars-cache-invalidate.
  • Preserved Codex packaging behavior: one root router skill, vendored workflow entry files named WORKFLOW.md, Codex setup/architecture overlays, excluded Claude/plugin loader files, nested-path lint adaptations, macOS Bash 3.2 audit wrapper compatibility, and explicit cross-model consent boundaries.

Notes

  • This sync pins ARS main, not an exact upstream tag. The nearest upstream tag is v3.12.0.

[0.1.11] - 2026-06-06

What's Changed

  • Updated the vendored ARS runtime from ca5b713d9d802af85d4c74552604b062a618b1c1 (v3.11.0 plus the first post-tag #310 follow-up fixes) to 2560a072386d4b1a035e5a40ed24ce1edbc0a356 (v3.11.1).
  • In plain terms: this brings the Codex package up to the ARS patch release that cleaned up the first wave of post-ship problems after v3.11.0. The main changes are correctness and hardening fixes for citation verification, domain evidence profiles, eval thresholds, policy markers, provenance joins, and edge cases around schema-valid security-boundary inputs.
  • Preserved the Codex packaging layer: one root router skill, vendored workflow entry files named WORKFLOW.md, Codex setup/architecture overlays, excluded Claude/plugin loader files, package-specific lint adaptations, and the explicit cross-model consent boundary.
  • Kept local Codex validation runnable on macOS Python 3.9 by avoiding Python-3.11-only standard-library assumptions in the vendored test utilities and by using the active Python executable in adapter subprocess tests.

Notes

  • No new Codex package feature was added. This is a vendor sync plus metadata release so Codex users get the same v3.11.1 runtime fixes as upstream ARS.

[0.1.10] - 2026-06-04

Added

  • Added an optional Codex full-runtime adapter profile under skills/academic-research-suite/codex/, including deterministic route planning, Codex agent-team templates, a disabled-by-default hook pack, and adapter quality gates. Default ARS Codex behavior remains inline role-prompt execution.

Changed

  • Vendored upstream ARS from 4c38571798da4b1ed604ec2c1e01a6f66a7de5a7 (v3.10.0 plus release-manifest alignment) to ca5b713d9d802af85d4c74552604b062a618b1c1 (v3.11.0 plus post-tag #310 follow-up fixes).
  • Added ARS v3.11 runtime content, including the deterministic citation verification gate, arXiv resolver, persistent verification cache, citation verification summary contract, standalone verification gate API, and ars-cache-invalidate command recipe.
  • Kept Codex-specific overlays: single root router skill, WORKFLOW.md vendored workflow entry files, Codex setup/architecture docs, nested-path lint patches, excluded showcase PDFs, macOS Bash 3.2 audit wrapper compatibility, and explicit cross-model consent boundaries.

Security

  • Added Codex security boundaries for untrusted research inputs, cross-model consent, local adapter filesystem handling, and fixed-host bibliographic API lookups.

[0.1.9] - 2026-06-01

Changed

  • Vendored upstream ARS from 96b82e82142dc95f117595c207d3e150b078e411 (v3.9.4.2) to 4c38571798da4b1ed604ec2c1e01a6f66a7de5a7 (v3.10.0 plus release-manifest alignment).
  • Added ARS v3.10 runtime content, including the triangulation policy layer, eval harness/gold sets, Schema 11 commitment-ledger refactor, domain-evidence/version-family updates, and scoped-write guard scripts.
  • Added newly vendored upstream README.zh-CN.md, README.ja-JP.md, evals/, conftest.py, and new ars-* command recipes.
  • Kept Codex-specific overlays: single root router skill, WORKFLOW.md vendored workflow entry files, Codex setup/architecture docs, nested-path lint patches, excluded showcase PDFs, and macOS Bash 3.2 audit wrapper compatibility.
  • Clarified beginner install instructions by using python3 in command examples and documenting the python fallback when it points to Python 3.
  • Added community acknowledgements for beginner-install feedback and issue discussion support.

[0.1.8] - 2026-05-19

Changed

  • Vendored upstream ARS from 74413a42571867abece7b8b76f7a24ac472ab2a0 (v3.9.0) to 96b82e82142dc95f117595c207d3e150b078e411 (v3.9.4.2).
  • Added ARS v3.9.1 client hardening, v3.9.2 phase-boundary routing discipline, v3.9.3 shared client utilities, and v3.9.4/v3.9.4.1 temporal verification runtime content.
  • Kept Codex-specific overlays: single root router skill, WORKFLOW.md vendored workflow entry files, Codex setup/architecture docs, nested-path lint patches, and macOS Bash 3.2 audit wrapper compatibility.

Notes

  • Upstream v3.9.4.2 changes only .github CI/release-gate files, which are intentionally excluded from this Codex package. The manifest still pins the exact v3.9.4.2 commit for provenance.

[0.1.7] - 2026-05-17

Changed

  • Aligned the Codex package with upstream ARS v3.9.0.