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docs/Tailer/Tailer_workflow.md

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# Tailer workflow
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This tutorial describes how to use [Tailer](https://github.com/TimNicholsonShaw/tailer) on High-performance Cluster such as ***Biowulf*** or ***FRCE***, then [Tailer-analysis](https://github.com/TimNicholsonShaw/tailer-analysis) locally on RStudio.
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## Install Tailer
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You may want to run this into a dedicated environment.
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```BASH
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module load python
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pip install jla-tailer
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```
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## Run Tailer
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```BASH
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Tailer -a annotation.gtf sample.bam
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```
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## Local Tailer-analysis
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Download and extract [Tailer-analysis](https://hpc.nih.gov/~RBL_NCI/tailer-analysis-local.zip)
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Open in RStudio. Click on Run App.
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mkdocs.yaml

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- Description: LEAFCUTTER/descript.md
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- Initialize: LEAFCUTTER/init.md
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- Run: LEAFCUTTER/run.md
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- Tailer:
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- Workflow : Tailer/Tailer_workflow.md

workflows/.DS_Store

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