stochastic-negatives-paper/gpu_env.yml at master · keiserlab/stochastic-negatives-paper · GitHub

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name: mygpu1
channels:
  - conda-forge
  - rdkit
  - r
  - defaults
dependencies:
  - libgpuarray=0.7.6=0
  - mako=1.0.7=py27_0
  - regex=2018.08.29=py27h470a237_0
  - theano=0.8.2=py27_0
  - _nb_ext_conf=0.3.0=py27_0
  - anaconda-client=1.6.0=py27_0
  - backports=1.0=py27_0
  - backports_abc=0.5=py27_0
  - bzip2=1.0.6=3
  - cairo=1.14.6=0
  - clyent=1.2.2=py27_0
  - configparser=3.5.0=py27_0
  - cycler=0.10.0=py27_0
  - decorator=4.0.11=py27_0
  - entrypoints=0.2.2=py27_0
  - enum34=1.1.6=py27_0
  - fontconfig=2.12.1=3
  - freetype=2.5.5=1
  - functools32=3.2.3.2=py27_0
  - get_terminal_size=1.0.0=py27_0
  - glib=2.50.2=1
  - h5py=2.6.0=np110py27_1
  - harfbuzz=0.9.39=1
  - hdf5=1.8.16=0
  - ipykernel=4.5.2=py27_0
  - ipython=5.1.0=py27_0
  - ipython_genutils=0.1.0=py27_0
  - ipywidgets=5.2.2=py27_1
  - jinja2=2.9.4=py27_0
  - jsonschema=2.5.1=py27_0
  - jupyter=1.0.0=py27_3
  - jupyter_client=4.4.0=py27_0
  - jupyter_console=5.0.0=py27_0
  - jupyter_core=4.2.1=py27_0
  - libffi=3.2.1=1
  - libgcc-ng=7.2.0=hdf63c60_3
  - libgfortran=3.0.0=1
  - libiconv=1.14=0
  - libpng=1.6.27=0
  - libsodium=1.0.10=0
  - libxml2=2.9.4=0
  - markupsafe=0.23=py27_2
  - matplotlib=1.5.1=np110py27_0
  - mistune=0.7.3=py27_0
  - mkl=11.3.3=0
  - mkl-service=1.1.2=py27_3
  - nb_anacondacloud=1.2.0=py27_0
  - nb_conda=2.0.0=py27_0
  - nb_conda_kernels=2.0.0=py27_0
  - nbconvert=4.2.0=py27_0
  - nbformat=4.2.0=py27_0
  - nbpresent=3.0.2=py27_0
  - nose=1.3.7=py27_1
  - notebook=4.3.1=py27_0
  - numpy=1.10.4=py27_2
  - openblas=0.2.14=4
  - openssl=1.0.2j=0
  - pandas=0.18.1=np110py27_0
  - pango=1.40.3=0
  - path.py=10.0=py27_0
  - pathlib2=2.2.0=py27_0
  - pcre=8.39=1
  - pexpect=4.2.1=py27_0
  - pickleshare=0.7.4=py27_0
  - pip=9.0.1=py27_1
  - pixman=0.34.0=0
  - prompt_toolkit=1.0.9=py27_0
  - ptyprocess=0.5.1=py27_0
  - pycairo=1.10.0=py27_0
  - pygments=2.1.3=py27_0
  - pygpu=0.7.6=py27h3010b51_0
  - pyparsing=2.1.4=py27_0
  - pyqt=4.11.4=py27_4
  - python=2.7.13=0
  - python-dateutil=2.6.0=py27_0
  - pytz=2016.10=py27_0
  - pyyaml=3.12=py27_0
  - pyzmq=16.0.2=py27_0
  - qt=4.8.7=4
  - qtconsole=4.2.1=py27_0
  - readline=6.2=2
  - requests=2.12.4=py27_0
  - scandir=1.4=py27_0
  - scikit-learn=0.17=np110py27_1
  - scipy=0.17.1=np110py27_1
  - seaborn=0.7.1=py27_0
  - setuptools=27.2.0=py27_0
  - simplegeneric=0.8.1=py27_1
  - singledispatch=3.4.0.3=py27_0
  - sip=4.18=py27_0
  - six=1.10.0=py27_0
  - sqlite=3.13.0=0
  - ssl_match_hostname=3.4.0.2=py27_1
  - terminado=0.6=py27_0
  - tk=8.5.18=0
  - tornado=4.4.2=py27_0
  - traitlets=4.3.1=py27_0
  - wcwidth=0.1.7=py27_0
  - wheel=0.29.0=py27_0
  - widgetsnbextension=1.2.6=py27_0
  - yaml=0.1.6=0
  - zeromq=4.1.5=0
  - zlib=1.2.8=3
  - boost=1.56.0=py27_3
  - rdkit=2016.03.1=np110py27_1
  - pip:
    - backports.shutil-get-terminal-size==1.0.0
    - backports.ssl-match-hostname==3.4.0.2
    - bioservices==1.4.7
    - lasagne==0.2.dev1
    - openbabel==1.7
    - pylearn2==0.1.dev0
    - requests-cache==0.4.11
    - suds-jurko==0.6
    - wrapt==1.10.6
prefix: /srv/home/ecaceres/anaconda2/envs/mygpu1