Repositories list

• jmzTab-m

  Public
  Reference implementation for mzTab-M 2.0 for metabolomics

  Java

  •

  Apache License 2.0

  •1010 forks•99 stars•1111 issues•1212 pull requests•Updated Aug 15, 2026Aug 15, 2026

• pygoslin

  Public
  Python implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).

  parsingnomenclaturegrammar+ 4

  parsingnomenclaturegrammarmetabolomicsmass-spectrometrylipidlipidomics

  HTML

  •

  Other

  •22 forks•44 stars•22 issues•55 pull requests•Updated Aug 12, 2026Aug 12, 2026

• LipidXte2

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 11, 2026Aug 11, 2026

• keycloak-docker-role-mapper

  Public
  Keycloak mapper implementation to support role-based authentication via Keycloak, mapping to docker registries push and pull scopes.

  keycloakdocker-registry-v2

  keycloakdocker-registry-v2

  Java

  •

  Apache License 2.0

  •55 forks•1313 stars•22 issues•55 pull requests•Updated Aug 6, 2026Aug 6, 2026

• goslin

  Public
  Goslin is the Grammar on succinct lipid nomenclature.

  parsingnomenclaturegrammar+ 4

  parsingnomenclaturegrammarmetabolomicsmass-spectrometrylipidlipidomics

  ANTLR

  •

  Other

  •33 forks•1414 stars•1313 issues•44 pull requests•Updated Jul 30, 2026Jul 30, 2026

• ils-ceramide-ring-trial

  Public
  R

  •00 forks•11 star•00 issues•22 pull requests•Updated Jul 25, 2026Jul 25, 2026

• jmzTab-m-webapp

  Public
  The mzTab Validator webapplication

  JavaScript

  •

  Apache License 2.0

  •22 forks•00 stars•22 issues•1212 pull requests•Updated Jul 25, 2026Jul 25, 2026

• goslin-webapp

  Public
  Web application and REST Api for parsers for the Grammars on succinct lipid nomenclature (Goslin).

  parsingnomenclaturegrammar+ 4

  parsingnomenclaturegrammarmetabolomicsmass-spectrometrylipidlipidomics

  Java

  •

  Apache License 2.0

  •00 forks•11 star•22 issues•1313 pull requests•Updated Jul 24, 2026Jul 24, 2026

• lipidspace

  Public
  LipidSpace

  C++

  •

  MIT License

  •00 forks•22 stars•00 issues•11 pull request•Updated Jul 23, 2026Jul 23, 2026

• jgoslin

  Public
  Java implementation of the latest shorthand nomenclature.

  parsingnomenclaturegrammar+ 4

  parsingnomenclaturegrammarmetabolomicsmass-spectrometrylipidlipidomics

  Java

  •

  Apache License 2.0

  •00 forks•44 stars•11 issue•1212 pull requests•Updated Jul 14, 2026Jul 14, 2026

• pymzTab-m

  Public
  The Python3 language bindings for mzTab-M

  Python

  •

  MIT License

  •77 forks•88 stars•22 issues•66 pull requests•Updated Jul 1, 2026Jul 1, 2026

• cppgoslin

  Public
  C++ implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).

  parsingnomenclaturegrammar+ 4

  parsingnomenclaturegrammarmetabolomicsmass-spectrometrylipidlipidomics

  C++

  •

  Other

  •00 forks•00 stars•11 issue•55 pull requests•Updated Jun 20, 2026Jun 20, 2026

• maptogo

  Public
  Gene Ontology (GO) for lipids

  Python

  •

  Other

  •00 forks•22 stars•00 issues•66 pull requests•Updated Jun 19, 2026Jun 19, 2026

• lipidcreator

  Public
  LipidCreator is a powerful stand alone kick-off tool for targeted lipidomics and a plugin for Skyline. It provides convenient tools to generate transition lists…

  C#

  •

  Other

  •22 forks•1111 stars•1212 issues•33 pull requests•Updated Jun 18, 2026Jun 18, 2026

• lipidxplorer

  Public
  Python

  •

  Other

  •11 fork•11 star•11 issue•00 pull requests•Updated Jun 17, 2026Jun 17, 2026

• lipidomics-checklist

  Public
  Lipidomics Checklist

  Perl

  •

  MIT License

  •00 forks•00 stars•22 issues•00 pull requests•Updated Mar 26, 2026Mar 26, 2026

• biohackathon_de_2025_pr6_studycase1

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 2, 2025Dec 2, 2025

• rmzTabM

  Public
  The R-language bindings for mzTab-M

  validationmetabolomicsmass-spectrometry+ 3

  validationmetabolomicsmass-spectrometrylipidomicsdata-formatmztab

  R

  •

  MIT License

  •44 forks•55 stars•99 issues•33 pull requests•Updated Nov 18, 2025Nov 18, 2025

• empirical-lipid-ms-score

  Public
  R

  •

  Other

  •00 forks•11 star•00 issues•00 pull requests•Updated Jun 10, 2025Jun 10, 2025

• .github

  Public
  LIFS Tools Overview

  bioinformaticsmetabolomicsmass-spectrometry+ 1

  bioinformaticsmetabolomicsmass-spectrometrylipidomics

  00 forks•00 stars•00 issues•00 pull requests•Updated May 25, 2025May 25, 2025

• lipidome_projector

  Public
  Python

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated May 11, 2025May 11, 2025

• csgoslin

  Public
  C# implementation of the Goslin framework

  HTML

  •

  Other

  •00 forks•00 stars•11 issue•55 pull requests•Updated Apr 8, 2025Apr 8, 2025

• mztabm-editor

  Public
  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•44 pull requests•Updated Feb 25, 2025Feb 25, 2025

• rustgoslin

  Public
  Rust implementation of the Goslin Parsers

  Rust

  •

  Other

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 7, 2025Feb 7, 2025

• lipidhome-web

  Public
  The web interface of LipidHome. Automatically exported from code.google.com/p/lipidhome.

  JavaScript

  •

  Apache License 2.0

  •22 forks•00 stars•00 issues•44 pull requests•Updated Dec 2, 2024Dec 2, 2024

• lipidcompass-code

  Public
  TypeScript

  •

  Apache License 2.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Nov 12, 2024Nov 12, 2024

• rgoslin

  Public
  Rgoslin Repository for Bioconductor submission

  C++

  •

  MIT License

  •00 forks•66 stars•11 issue•00 pull requests•Updated Jun 14, 2024Jun 14, 2024

• streamlit-ontology-elements

  Public
  JavaScript

  •

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Dec 19, 2023Dec 19, 2023

• flipr-transition-extractor

  Public
  MSDK-based tool to extract MS2 transition data for CE series from mzML files

  Java

  •

  Apache License 2.0

  •00 forks•00 stars•11 issue•1212 pull requests•Updated Dec 5, 2023Dec 5, 2023

• bioconda-recipes

  Public
  Conda recipes for the bioconda channel.

  Shell

  •

  MIT License

  •4k4k forks•00 stars•00 issues•00 pull requests•Updated Nov 28, 2023Nov 28, 2023