Search results

Can ALRA make imputation on CPM data?

Status: Open.

#31 In KlugerLab/ALRA;

· Alvis-Jiang opened on Oct 6, 2024

In nrow(A_norm) * ncol(A_norm) : NAs produced by integer overflow

Status: Open.

#30 In KlugerLab/ALRA;

· haoqing12 opened on Apr 30, 2024

Large matrix errors (more than 2^31-1 non-zero entries) [on large datasets]

Status: Open.

#29 In KlugerLab/ALRA;

· ghost opened on Feb 28, 2024

marker genes not specific for cluster after imputation

Status: Open.

#27 In KlugerLab/ALRA;

· yamihn opened on Dec 5, 2023

help with alra

Status: Open.

#26 In KlugerLab/ALRA;

· mocherry opened on Nov 30, 2023

Which selection.method to use for FindingVariableFeatures on ALRA imputed data

Status: Open.

#25 In KlugerLab/ALRA;

· Rohit-Satyam opened on Jul 13, 2023

ALRAChooseKPlot throws error

Status: Open.

#24 In KlugerLab/ALRA;

· Rohit-Satyam opened on Jul 7, 2023

Differential expression

Status: Open.

#22 In KlugerLab/ALRA;

· DzenisKoca opened on Aug 19, 2022

Running ALRA with multiple samples

Status: Open.

#21 In KlugerLab/ALRA;

· msraredon opened on Jul 29, 2022

Final proportion of non-zero values is large.

Status: Open.

#20 In KlugerLab/ALRA;

· ayeTown opened on Jul 26, 2022

ALRA and Seurat

Status: Open.

#17 In KlugerLab/ALRA;

· jsim91 opened on May 20, 2022

Imputation before other QC steps?

Status: Open.

#16 In KlugerLab/ALRA;

· ayeTown opened on May 5, 2022