feat: add mutation pattern analysis#1767

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ivan-aksamentov wants to merge 9 commits into

feat/mutation-pattern-analysis

Commits on May 26, 2026

feat(analyze): add mutation pattern config types and analysis engine
ivan-aksamentov
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refactor(qc): decouple SNP cluster rule from cluster computation
ivan-aksamentov
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feat(nextclade): integrate mutation patterns into pipeline and output
ivan-aksamentov
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feat(web): add mutation cluster markers and pattern tooltips
ivan-aksamentov
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docs(nextclade): document mutation pattern configuration and output
ivan-aksamentov
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fix(csv): use per-pattern dynamic columns for mutation patterns TSV output
ivan-aksamentov
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test(csv): add tests for per-pattern mutation pattern column generation
ivan-aksamentov
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refactor: lint
ivan-aksamentov
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fix: remove generated _SchemaRoot.d.ts from tracking
ivan-aksamentov
committed