Simulate the C. Elegans worm brain in your browser and interact with the worm as it moves around

WormPose: Image synthesis and convolutional networks for pose estimation in C. elegans

[Comms Bio 2023] Official Code for Fast Detection of Slender Bodies in High Density Microoscopy Data

Repository for WormSwin: Instance segmentation of C. elegans using vision transformer as appeared in Nature Scientific Reports 2023.

Setting up C elegans as an RL environment.

Implementation of CShaper https://doi.org/10.1038/s41467-020-19863-x

Fluorescent analysis of individualized C. elegans without using neural networks

Active inference sensorimotor simulations: artificial life built from PAULA neurons, biological connectomes (C. elegans), and MuJoCo physics

Behavioural simulation of C. elegans nematode

[Mathematics 2023] A Connectome-Based Digital Twin Caenorhabditis elegans Capable of Intelligent Sensorimotor Behavior

SIM-CE is an advanced, user-friendly modeling and simulation environment in Simulink, for performing multi-scale behavioral analysis of the nervous system of Caenorhabditis elegans (C. elegans).

Echo State Network library for reservoir computing.

Development and training of advanced machine learning neural models designed to simulate worm cognition in response to the unique stressors of space, such as increased radiation and altered gravity and understand impact on worm behavior and cognition.

Self-supervised vision-only world model for C. elegans — Phase 0 software validation on public data, pre-registered.

Bizzare conglomerate of C. Elegans and neuroscience thoughts.

Newtonian mechanics model for C. elegans locomotion

Real-time C. elegans active-inference simulation streamed over WebSocket to a browser canvas — add/remove food live

WormRuler: A video analysis software to analyze body length of Caenorhabditis elegans

BraindGo db — Brain simulation database → Robot driving engine, from C. elegans to humanoid