gene-sequencing

Community-driven, simple, yet powerful framework for fast, cost-effective distributed Compute over Data.

Gene and Primer Sequence Analysis for SARS-CoV-2, EGFR(Non Small Lung Cancer Cell), Influenza DNAs ### How can I check my Oligo primers to ensure there are no significant primer design issues? - The difference between melting temperatures (Tm) of the primers should be less than 5°C. - The GC content should be between 35-80% or equivalent to the …

Suite of mycology applications and tools for automating common lab workflows.

Compilation of Gene Analysis Algorithms and Mutation Search Algorithms for hopefully some useful Machine Learning application later.

Whitepaper on application of genetic alignment on religious discourses. Base corpus: LDS Journal of Discourses comprised of hundreds of religious discourses.

This project alligns genetic sequences locally

Aligning multi-hybrid foundation models for genome generation with domain adaptation to human genetics

A soft-tool for automated gene extraction, gene sequencing analysis and dataset generation.

Utilizing support vector machines, naïve bayes classification and neural networks to find which gives the best results of classification of DNA sequence data into 7 different protein classes.

Perform a de-novo assembly of an unknown organism and report workflows and findings. Illumina PE 101x2, insert size 350bps +/- 50, PacBio long reads. Develop a Java program with a GUI to vizualise and report quality metrics for the best three assembly attempts.

Atantares (芯宿科技) is a Chinese synthetic-biology company based in Suzhou Industrial Park that builds "silicon-based biology" — semiconductor-driven biotechnology. Its chip-based, high-throughput platform (the EcoSyn synthesizer and ECHOS MicroArray, using electrochemical oligonucleotide synthesis on CMOS/MEMS microelectrode arrays) drives low-cost…

Demo using Python/FastAPI/JS/jQuery/Bootstrap/ChartJS - (Backend + Frontend UI) framework with an input to add sequences, search for the 'G' Quadruplexes that displays the start & end positions in a table & a bar graph for better yield rate.

Gene download from NCBI database, sequence alignment and clusterization, realization of different bioinformatics algorithms within ITMO 4 sem course