Julia framework for spatial ecology - data types and utilities
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Jun 29, 2026 - Julia
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macroecology
Here are 32 public repositories matching this topic...
An R package to generate ecologically-informed species range maps from occurrence data with seamless GBIF integration
taxonomy synonyms r-package filtering flags gbif-api large-scale range-maps macroecology iucn-red-list species-distribution ecoregions environmental-classification accepted-names hard-limit species-observations
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Jun 29, 2026 - R
population and community dynamics on spatial graphs, in julia.
simulation julia dynamics ecology community-ecology landscape-ecology macroecology spatial-ecology ecojulia
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May 21, 2025 - Julia
Spatial analysis and simulation of ecological communities
r simulation rstats species r-package biodiversity rarefaction macroecology species-abundance-distributions point-pattern-analysis
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May 29, 2026 - R
Functions and types to access GBIF data from Julia
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Dec 11, 2022 - Julia
Processing NEON soil microbe marker gene sequence data into ASV tables.
bioinformatics neon r-package marker-genes macroecology biogeography dada2 soil-microbiome neonmicrobe
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Apr 9, 2024 - R
Repository for the manuscript: 'Impacts of past abrupt land change on local biodiversity globally'
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Oct 20, 2019 - R
Spatial patterns in biodiversity change
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Sep 2, 2017 - R
📋 Proof of Concept of the Vulnerability Framework
plants conservation vulnerability island biodiversity threats macroecology global-change vertebrates
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Feb 10, 2026 - R
Data, code & figures used to assess global patterns of potential thermal niche filling
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Sep 21, 2023 - R
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Jun 6, 2026 - R
Repository for the R package "envar", designed to download and process environmental variables for macroecology and biogeography
environment r variable variable-selection conservation ecology sdm macroecology biogeography prioritization distribution-modelling
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Jul 2, 2026 - R
A global, taxon-stratified, high-resolution sampling-effort dataset from GBIF for bias-aware ecological modelling — reproducible R-based workflow for generating global sampling-effort rasters from GBIF occurrence records across spatial, temporal, and taxonomic scales. For more details, see El-Gabbas (2026), Diversity and distributions (accepted).
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May 19, 2026 - R
My personal repository
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Oct 21, 2025
data and R code to reproduce the analysis and plots presented in the manuscript: "Macrophenological dynamics from citizen science plant occurrence data"
machine-learning binary-data data-driven synchronisation biodiversity citizen-science flora jaccard-distance macroecology isomap phenology occurrence spatio-temporal-dynamics nonlinear-dimension-reduction plant-phenology group-behaviour flora-incognita
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Jun 7, 2024 - R
Paper - Best practices for building and curating databases for comparative analyses
review database open-science biomechanics commentary meta-analysis macroecology ecophysiology macroevolution macrophysiology comparative-physiology
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Mar 15, 2022 - R
This repository contains the R code and the associated data files that were used to execute the entire workflow for the manuscript "Habitat and not topographic heterogeneity constrains the range sizes of African mammals" (published in the Journal of Biogeography)
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Jul 18, 2024 - R
Paper - Seasonal fattening among bat populations
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Jul 11, 2025 - R
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