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13 changes: 13 additions & 0 deletions src/index.html
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Expand Up @@ -291,6 +291,7 @@ <h3><span class="icon icon-generic" data-icon="'" aria-hidden="true"></span> Pre
<li>Prepare valid VCF file(s), which can be validated prior to submission using the <a href="https://github.com/EBIvariation/eva-sub-cli" target="_blank">eva-sub-cli tool</a>.</li>
<li>Complete a <a href="https://raw.githubusercontent.com/EBIvariation/eva-sub-cli/main/eva_sub_cli/etc/EVA_Submission_template.xlsx" target="_blank">metadata template</a> describing the samples and analyses in your study. This can be validated alongside your VCF files with <a href="https://github.com/EBIvariation/eva-sub-cli" target="_blank">eva-sub-cli</a>. Please provide as much metadata as possible since this information is useful for downstream analysis and leads to increased dataset reuse. For reference, here is an <a href="https://raw.githubusercontent.com/EBIvariation/eva-sub-cli/main/eva_sub_cli/etc/EVA_Submission_Example.xlsx" target="_blank">example</a> of a completed metadata template.</li>
<li>Please also note that the template requires the submitter to fill in some personal data, which will be used as described in our <a href="https://www.ebi.ac.uk/data-protection/privacy-notice/embl-ebi-public-website/" target="_blank">privacy notice</a>.</li>
<li>If your submission contains human genotype data, then please provide a signed copy of our <a href="https://docs.google.com/document/d/1UaRmimAe919IZYIH55mDXMe-4sHsRVqaP4moqx2IYE4" target="_blank">Consent Statement</a> via email to <a href="mailto:eva-helpdesk@ebi.ac.uk">eva-helpdesk@ebi.ac.uk</a>. See our <a href="?Help#submissionPanel&link=consent-statement-for-human-genotype-data" target="_blank">help</a> section for more info.</li>
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<li><a href="#submitted-data-held-privately">Can my submitted data be held privately at the EVA?</a></li>
<li><a href="#what-data-is-brokered-to-dbsnp">Which data is brokered to DBSNP?</a></li>
<li><a href="#how-do-we-deal-with-chromosome-name-diversity">How do we deal with chromosome or contig name diversity?</a></li>
<li><a href="#consent-statement-for-human-genotype-data">Consent statement for human genotype data</a></li>
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<a class="accordion-title"><h5>Consent statement for human genotype data</h5></a>
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<p>The EVA is an open access resource, and it is the submitter's responsibility to ensure their data is compliant with this policy.
If human genotype data is to be submitted then we request a <a href="https://docs.google.com/document/d/1UaRmimAe919IZYIH55mDXMe-4sHsRVqaP4moqx2IYE4" target="_blank">Consent Statement</a> to be completed prior to submission via email to <a href="mailto:eva-helpdesk@ebi.ac.uk">eva-helpdesk@ebi.ac.uk</a>.
Your submission will only be processed after receiving the consent statement. If your data contains allele frequency and no genotypes then no consent statement is needed.
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Please consider that if your data requires controlled access, an alternative EMBL-EBI service, the European Genome-phenome Archive (EGA; www.ebi.ac.uk/ega), will be more suitable for your submission.</p>
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